*CIMRS authors.


FY 2008             

Auth*, T., R. Brodeur, and K. Fisher. 2007.  Diel variation in vertical distribution of an offshore ichthyoplankton community off the Oregon coastFishery Bull. 105 (3): 313-326.

Baldwin*, R.E., T.W. Miller*, R. D. Brodeur and K.C. Jacobson.  2008.  Expanding the foraging history of juvenile Pacific salmon: combining stomach-content and macroparasite-community analyses for studying marine diets.  J. Fish Biol. 72(6): 1268-1294.

Brodeur, R.D., E.A. Daly*, R.A. Schabetsberger*, and K.L. Mier.  2007.  Interannual and interdecadal variability in juvenile coho salmon (Onchorhyncus kisutch) diets in relation to environmental changes in the northern California Current.  Fish. Oceanogr. 16(5): 395-408.

Brodeur, R. D., C.L. Suchman, D.C. Reese, T.W. Miller*, and E.A. Daly*. 2008. Spatial overlap and trophic interactions between pelagic fish and large jellyfish in the northern California Current. Mar. Biol. 154 (4): 649-659.

Emmett, R.L. and G. K Krutzikowsky*.  2008. Nocturnal feeding of Pacific hake and jack mackerel off the mouth of the Columbia River, 1998-2004: Implications for juvenile salmon predation. Trans. Amer. Fish. Soc. 137 (3): 657-676.

Field, J.C., K. Baltz, A.J. Phillips*, and W.A. Walker.  2007.  Range expansion and trophic interactions of the jumbo squid, Dosidicus gigas, in the California Current.  CalCOFI Repts. 48: 131-146.

Fisher*, J., M. Trudel, A. Ammann, J. A. Orsi, J. Piccolo, C. Bucher, E. Casillas, J. A. Harding, B. MacFarlane, R. D. Brodeur, J. F. T. Morris, and D. W. Welch. 2007. Comparisons of the coastal distribution and abundance of juvenile salmon from central California to the northern gulf of Alaska. In: Grimes, C. B., R. D. Brodeur, L. J. Haldorson, and S. M. McKinnell, editors. The Ecology of Juvenile Salmon in the northeast Pacific Ocean: Region­al Comparisons. American Fisheries Society, Symposium 57, Bethesda, Maryland, pages 31–80.

Gertsev, V.I., Gertseva*, V.V., Matson, S.E. 2008. Population as an oscillating system. Ecological Modelling 210(3): 242-246.

Gomez-Guitierrez, J., L.R. Feinberg*, T.C. Shaw*, and W.T. Peterson.  2007.  Interannual and geographical variability of the brood size of the euphausiids Euphausia pacifica and Thysanoessa spinifera along the Oregon coast (1999-2004).  Deep-Sea Res. I 54: 2145-2169.

Morris, J. F. T., M. Trudel, M. E. Thiess, R. M.Sweeting, J. Fisher*, S. A. Hinton, J. A. Orsi,E. V. Farley, Jr., and D. W. Welch. 2007. Stock-specific migrations of juvenile coho salmon derived from coded-wire tag recoverieson the continental shelf of western North America. In: Grimes, C.B., R. D. Brodeur, L. J. Haldorson, and S. M. McKinnell, editors. The Ecology of Juvenile Salmon in the northeast Pacific Ocean: Regional Comparisons. American Fisheries Society, Symposium 57, Bethesda, Maryland, pages 81–104.

Peterson*, J.O. and W.T. Peterson. 2008. Influence of the Columbia River plume (USA) on the vertical and horizontal distribution of mesozooplankton over the Washington and Oregon shelf.  ICES J. Mar. Sci. 65 (3): 477-483.

Phillips*, A.J., S. Ralston, R.D. Brodeur, T.D. Auth*, R.L. Emmett, C. Johnson, and V.G. Wespestad.  Recent pre-recruit Pacific hake (Merluccius productus) occurrences in the northern California Current suggest a northward expansion of their spawning area.  CalCOFI Repts. 48: 215-229.

Ruzicka*, J.J., R.D. Brodeur, and T.C. Wainwright.  2007.  Seasonal food web models for the Oregon inner-shelf ecosystem:  investigating the role of large jellyfishCalCOFI Repts. 48: 106-128.

Suchman, C. L., E. A. Daly*, J.E. Keister*, W.T. Peterson, R.D. Brodeur. 2008. Feeding patterns and predation potential of scyphomedusae in a highly productive upwelling region. Mar. Ecol. Prog. Ser. 358: 161-172.

Suryan*, R.M., K.S. Dietrich, E.F. Melvin, G.R. Balogh, F. Sato, K. Ozaki. 2007. Migratory routes of short-tailed albatrosses: Use of exclusive economic zones of North Pacific Rim countries and spatial overlap with commercial fisheries in Alaska.  Biological Conservation 137: 450-460.

Trudel, M., M. E. Thiess, C. Bucher, E. V. Farley, Jr., R. B. MacFarlane, E. Casillas, J. Fisher*, F. T. Morris, and J. M. Murphy. 2007. Regional variation in the marine growth and energy accumulation of juvenile Chinook salmon and coho salmon along the west coast of North America. In: Grimes, C. B., R. D. Brodeur, L. J. Haldorson, and S. M. McKinnell, editors. The Ecology of Juvenile Salmon in the northeast Pacific Ocean: Regional Comparisons. American Fisheries Society, Symposium 57, Bethesda, Maryland, pages 205–232.


FY 2007       

Auth*, T.D. and R.D. Brodeur.  2006.  Distribution and community structure of ichthyoplankton off the coast of Oregon, USA, in 2000 and 2002.  Mar. Ecol. Progr. Ser.  319: 199-213.

Bi*, H. and M. Benfield.  2006.  Egg production rates and stage-specific development times of Clausocalanus furcatus (Copepoda, Calanoida) in the northern Gulf of Mexico.  2006.  J. Plankton Res. 28(12): 1199-1216.

Brodeur, R.D., S. Ralston, R.L. Emmett, M. Trudel, T.D. Auth*, and A. J. Phillips*. 2006.  Anomalous pelagic nekton abundance, distribution and apparent recruitment in the northern California Current in 2004 and 2005Geophys. Res. Lettr. 33 L22S08, doi: 10.1029/2006GL026614.

Bucklin, K.A., M.A. Banks*, and D. Hedgecock.  2007.  Assessing genetic diversity or protected coho salmon (Onchorhynchus kisutch) populations in CaliforniaCanadian J. Fish. & Aquat. Sci. 64(1):30-42.

Feinberg*, L.R., C. Tracy Shaw*, and W.T. Peterson. 2007.  Long-term laboratory observations of Euphausia pacifica  fecundity: comparison of two geographic regionsMar. Ecol. Prog. Ser. 341: 141-152.

Feinberg*, L.R., C. Tracy Shaw*, and W.T. Peterson. 2006. Larval development of Euphausia pacifica in the laboratory: variability in developmental pathwaysMar. Ecol. Prog. Ser. 316: 127-137.

Gertseva*, V.V. and V.I. Gertsev. 2006. A conceptual model of fish functional relationships in marine ecosystems and its application for fisheries stock assessment. Fish. Res. 81 (1): 9-14.

Gomez-Gutierrez, J., L.R. Feinberg*, T. Shaw*, and W.T. Peterson.  2006.  Variability in brood size and female length of Euphausia pacifica among three populations in the North Pacific.  Mar. Ecol. Prog. Ser. 323: 185-194.

Helama, S., B.R. Schone, B.A. Black*, E. Dunca.  2006. Constructing long-term proxy series for aquatic environments with absolute dating control using a schlerochronological approach: introduction and advanced applications.  Mar. and Freshwat. Res. 57(6): 591-599.

Hooff*, R.C. and W.T. Peterson. 2006.  Copepod biodiversity as an indicator of changes in ocean and climate conditions of the northern California current ecosystemLimnol. & Oceanogr. 51(6): 2607-2620.

Peterson, B., R. Emmett, R. Goergicke, E. Venrick, A. Mantyla, S.J. Bograd, F.B. Schwing, S. Ralston, K.A. Forney, R. Hewitt, N. Lo, W. Watson, J. Carlow, M. Lowry, B.E. Lavaniegos, F. Chavez, W.J. Sydeman, D. Hyrenbach, R.W. Bradley, P. Warzybok, K. Hunter*, S. Benson, M. Weise, J. Harvey.  2006.  The state of the California current, 2005-2006: Warm in the North, cool in the South.  CalCOFI Reports 47: 30-74.

Qayum*, H.A., A. Klimley, R. Newton, and J. Richert.  2007.  Broad-band versus narrow-band irradiance for estimating latitude by archival tags.  Marine Biol. 151(2): 467-481.

Suryan, R.M., F. Sato, G. Balogh, K.D. Hyrenbach, P. Sievert, and K. Ozaki. 2006. Foraging destinations and marine habitat use of short-tailed albatrosses: A multi-scale approach using first-passage time analysis.  Deep-Sea Research II 53:370-386.

Van Doornik, D.M., D.J. Teel, D.R. Kuligowski, C.A. Morgan*, and E. Casillas. 2007.  Genetic analyses provide insight into early ocean stock distribution and survival of juvenile coho salmon off the coasts of Washington and Oregon.  N.A. J. Fish. Mgmt. 27(1): 220-237.

Wainwright, T.C., L.R. Feinberg*, R. Hooff*, W.T. Peterson. 2007. A comparison of two lower trophic models for the California Current System. Ecol. Model. 202(1-2): 120-131.


FY 2006

Black*, B.A., G.W. Boehlert, and M.M. Yoklavich.  2005.  Using tree-ring crossdating techniques to validate age in long-lived fishes.  Can. J. of Fish. And Aquat. Sci. 62(10): 2277-2284.

Brodeur, R.D., J.F. Fisher*, R.L. Emmett, C.A. Morgan* and E. Casillas.  2005.  Species composition and community structure of pelagic nekton off Oregon and Washington under variable oceanographic conditions.  Mar. Ecol. Prog. Ser. 298: 41-57.

DeRobertis, A., C.A. Morgan*, R.A. Schabetsberger*, R.W. Zabel, R.D. Brodeur, R.L. Emmett, C.M. Knight*, G.K. Krutzikowsky*, and E. Casillas.  2005. Columbia River plume fronts, II.  Distribution, abundance, and feeding ecology of juvenile salmon.  Mar. Ecol. Prog. Ser.  299: 33-44.

Emmett, R.L., G.K. Krutzikowsky*, and P. Bentley. 2006. Abundance and distribution of pelagic piscivorous fishes in the Columbia River plume during spring/early summer 1998-2003: Relationship to oceanographic conditions, forage fishes, and juvenile salmonidsProg. Oceanogr. 68(1): 1-26.

Feinberg*, L.R., C.T. Shaw*, and W.T. Peterson.  2005.  Larval development of Euphausia pacific in the laboratory, with an emphasis on variability in developmental pathways.  Marine Ecol. Prog. Ser 316: 127-137

Fisher*, J.P. and W.G. Pearcy.  2005.  Seasonal changes in growth of coho salmon (Ochorhynchus kisutch) off Oregon and Washington and concurrent changes in the spacing of scale circuli.  Fish. Bull. 103(1): 34-51.

Gertseva*, V.V., V.I. Gertsev, and N.Y. Ponomarev.  2006.  Integrative model of a population distribution in a habitat.  Ecol. Model. 193 (3-4): 575-588.

Goericke, R., E. Venrick, A. Mantyla, S.J. Bograd, F.B. Schwing, A. Huyer, R.L. Smith, P.A. Wheeler, R. Hooff, W.T. Peterson, F. Chavez, C. Collins, B. Marinovic, N. Lo, G. Gaxiola-Castro, R. Durazo, K.D. Hyrenbach, W.J. Sydeman.  2005.  The state of the California Current, 2004-2005: Still cool?  Calif. Coop. Ocean. Fish. Invest. Repts. 46: 122-143.

Huyer, A., J.H. Fleischbein, J.E. Keister*, P.M. Kosro, N. Perlin, R.L. Smith, and P.A. Wheeler.  2005. Two coastal upwelling domains in the Northern California Current SystemJ. Mar. Res. 63: 901-929.

Keister*, J.E., T.B. Johnson, C.A. Morgan*, and W.T. Peterson. 2005.  Biological indicators of the timing and direction of warm-water advection during the 1997/1998 El Nino off the central Oregon coast, USAMar. Ecol. Prog. Ser. 295: 43-48.

Lamb*, J. and W.T. Peterson. 2005  Ecological zonation of zooplankton in the COAST study region off central Oregon in June and August 2001 with consideration of retention mechanisms.  J. Geophys. Res. 110, C10S15, doi: 10.1029/2004JC002520, 2005.

Morgan*, C.A., A. DeRobertis, and R.W. Zabel.  2005.  Columbia River plume fronts.  I. Hydrography, zooplankton distribution, and community compositionMar. Ecol. Prog. Ser. 299: 19-31.

Suryan, R.M. D.B. Irons, E.D. Brown, P.G.R. Jodice, and D.D. Roby.  2006.  Site-specific effects on productivity of an upper trophic-level marine predator: Bottom-up, top-down, and mismatch effects on reproduction in a colonial seabird.  Prog. Oceanogr. 68(2-4): 303-328.